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مشاهده بیشتر
کتابخانه
توضیح خلاصه
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library to help with understanding machine learning math models like, Markov Models, Temporal models e.t.c
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library to help with understanding machine learning math models like, Markov Models, Temporal models e.t.c
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A Python interface to compute biodiversity metric based on landscape elevational connectivity.
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A Python package for plotting BioLector results
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Package for common tasks in bioinformatics.
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Schema and generated objects for biolink data model and upper ontology
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Biolink Modeling Language
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'A high level datamodel of biological entities and associations'
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A lightweight bioinformatics framework with automated tracking of diagnostics and provenance.
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Get metadata and ontological information about all biomedical entities.
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A deep generative framework for disentangling known and unknown attributes in single-cell data.
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Reusable and maintained Luigi tasks to incorporate in bioinformatics pipelines
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Biom3d. Framework for easy-to-use biomedical image segmentation.
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Bio-related data management using graph databases and web semantics.
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Tools for bioinformatics
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biomap: mapping and standardizing biological entities..
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Curated and predicted mappings between biomedical identifiers in different namespaces
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Utilities for performing biomarker survival analyses
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Access BioMart from the command line.
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Simple interface for accessing biomaRt from Python (via rpy2 and pandas)
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Tools for scripting bio-automation protocols
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Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
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Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
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Python API for managing the Biomatx home automation system
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A biomedical and clinical natural language processing engine.
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A biomedical and clinical natural language processing engine.
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BioMedLM - Finetune LLM For Medical/Health
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Python 3 library for accessing and managing BioMedical sheets
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Use biological data to generate SQL database schema
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Tools for dealing with metal binding sites.
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A set of helper functions for working with biological metadata from the SRA.
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Package for meta-analysis of reads compared to features
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This package is applied to calculate thermal indicators for human biometeorology. The available thermal indicators are Physiological Equivalent Temperature (PET), modified Physiological Equivalent Temperature (mPET), Predicted Mean Vote (PMV), Standard Effective Temperature* (SET*) and Universal Thermal Climate Index (UTCI) in this package. An additional function named GlobalRadiation_Tmrt is appended in the package for applying G, N, and Omega to calculate Tmrt from part of original RayMan model code.
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Biome-text is a light-weight open source Natural Language Processing toolbox built with AllenNLP
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Package to generate sample based biometrics.
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This application records and reports biometric measurements (e.g. weight, blood pressure, pulse)
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Biological Observation Matrix (BIOM) format
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A MiMo library for biological data
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Bioinformatics data-mining
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Variant call adjudication
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Tools for quality controlling the BioModels database
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Convert FASTQ and FASTA files to emoji.
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https://github.com/cyrusmaher/mosaic
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Tool to identify insertion sequences from whole-genome sequencing data.
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Bioinformatics Neural Architecture Search
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Machine learning code and resources for analyzing choroid plexus pathology
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BioNetComp: A Python package for biological network comparison from STRING database.
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A simple CLI and library for BioNetGen modelling language
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A Python framework for building, running, and sharing data science workflows
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Action platformer game where a bionic boy protects humanity by fighting robots
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A Novel Environment
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Automate CRUD actions with a Falcon API
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Gaussian distributions
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Bionty: Data model generator for biology.
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Library for working with biological sequence data as numpy arrays.
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odo extensions for use with bioinformatics
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Tools for biomedical ontologies.
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BIOMASS Product Algorithm Laboratory
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Machine Learning Library Extensions
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Pantograph is a toolbox for the reconstruction, curation and validation of metabolic models.
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PAST: latent feature extraction with a Prior-based self-Attention framework for Spatial Transcriptomics
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A graphical user interface for feature extraction from heart- and breathing biosignals.
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biostrand bioinformatics pipelines
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Pipeable commandline utilities for simple bioinformatics research.
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Bioinformatics processes/pipelines that can be run from `pipen run`
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An application to quickly generate plate schemes used in life science, save it in database and export it in nice table format or in spreadsheet
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Python-side access to PPI data from Gygi lab
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to create figures for biology.
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A data visualization package for bioinformatians and computational biologist
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Plotting templates common in biological sciences.
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A python package for drawing some bioinformatic pictures.
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A set of PyPPL processes for bioinformatics.
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BioProv - Provenance capture for bioinformatics workflows
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Bioprocess simulator
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A Python package for the analysis of biopsychological data.
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Python parser for ISAtab, a biological file format for experimental metadata
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PyMINEr Norm: A normalization package for scRNAseq
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Freely available tools for computational molecular biology.
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Interconvert various file formats supported by biopython. Supports querying records with JMESPath.
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Misc utilities and definitions not included or hidden in BioPython
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A bionformatic tookits
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a PyMOL plugin and python package for visualization, comparison, and volume calculation of protein drug-binding sites
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Allows reading Bio-Rad *.1sc image/analysis files.
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Utilities to read BIOPAC AcqKnowledge files
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Bio file readers, instrument schema.
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Bio file readers, instrument schema.
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Biorefinery models in BioSTEAM
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Integrated registry of biological databases and nomenclatures
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A tool for easy and fast access to biological big data
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A package to convert gene identifiers between different naming conventions
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Library for modeling residence time distributions (RTD) of integrated continuous biomanufacturing processes.