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مشاهده بیشتر
کتابخانه
توضیح خلاصه
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Binstar command line client library
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UNKNOWN
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Estimate physical quantities of a binary star system from observed quantities.
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Binstream is used for serializing and deserializing basic types. It is compatible with the .NET System.IO.BinaryReader and BinaryWriter classes, and is useful as a bridge when exchanging data with the .NET framework.
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A Collaboration framework for binary analysis tasks.
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Binary Table File - efficient binary file format to store and retrieve tabular data
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A tiny and temporary db for quick data cleansing and transformation.
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Bintang Badminton Court Availability Finder
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Binary integer representation toolkit
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Tools for Binary and Text data.
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Toolkit for Elf / Dwarf handling.
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Wrapper for (parts of) the Bintray API
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Call (parts of) the Bintray API from the command-line
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Python Wrapper for Bintray API
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Simple BinTray utility for uploading Debian packages.
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Analysis tool for estimating the likelihood that a binary contains compressed or encrypted bytes
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Teach You A Binary Exploitation For Great Good.
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Client package for Binubuo synthetic data generator
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Python wrapper for Binusmaya web API
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Python Binary Tools
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Binary Dumper
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Library for loading & saving the Binvox files
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Firmware analysis tool
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Binary Workbench command line client
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binwen framework peewee
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Interfaces for an in-memory datastore and calc framework using marshmallow + pandas
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This is just a template to create a new cli
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generates og image for xebia.com and binx.io blog
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bio
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Bio2BEL ADEPTUS.
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Downloader, parser, and BEL converter for FamPlex
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Bio2BEL HIPPIE.
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A package for converting the Human microRNA Disease Database (HMDD) to BEL.
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Converts the human symptoms-disease network produced by Zhou and Himmelstein to BEL
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Bio2BEL PFAM.
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Bio2BEL SIDER.
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Bio42. Analyser and database manager and for large biological networks stored in Neo4j.
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Class content for students at BYU who are taking BIO 465 - Capstone in Bioinformatics
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File format for 96-well plate layouts
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Library for viral diversity estimation and identification using next-gen sequencing data.
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A Deep Learning Framwork for Bioinformatics.
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Genetic Analysis Tools
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Anglerfish, a tool to demultiplex Illumina libraries from ONT data
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Sequence-based identification and characterization of protein classes
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Antigen Receptor Classifier
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Python bioarchaeology
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Assembly refinement tools, mostly useful for (but not limited to) pacbio bacterial assemblies
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Bioinformatic toolkit with python (It's still under development!)
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Simple implementations of attention modules adapted for the biological data domain
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bioBakery workflows: A collection of meta'omic analysis workflows
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call biobambam tools and store time/mem metrics in sqlitedb
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Hooks to allow system to integrate with PHP Biobank server
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UKBiobank Python pre-processing
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Python scripts for UKB data
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Biobank Tools.
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Biobb module collection.
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Biobb_3DShaper is use case to run a simulation with 3DSHAPER and PyTorch.
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Biobb_adapters is the Biobb module collection to use the building blocks with several workflow managers.
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Biobb_amber is a BioBB category for AMBER MD package.
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Biobb_analysis is the Biobb module collection to perform analysis of molecular dynamics simulations.
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Biobb_chemistry is the Biobb module collection to perform chemistry over molecular dynamics simulations.
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biobb_cmip is the Biobb module collection to compute classical molecular interaction potentials.
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Biobb_common is the base package required to use the biobb packages.
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Biobb_cp2k is a BioBB category for CP2K QM package.
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Biobb_disc4alldata is a complete code wrapper to interrogate the Disc4All pre-process database REST API.
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Biobb_disgenet is a complete code wrapper to interrogate the DisGeNET database REST API.
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Biobb_dna is a package composed of different analyses for nucleic acid trajectories.
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biobb_flexdyn is a BioBB category for studies on the conformational landscape of native proteins.
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biobb_flexserv is a BioBB category for biomolecular flexibility studies on protein 3D structures.
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Biobb_godmd is a BioBB category for GOdMD tool (protein conformational transitions).
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biobb_gromacs is the Biobb module collection to perform molecular dynamics simulations.
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Biobb_Guild is use case to build a prioritize PPI Network through Disc4All pre-process database REST API.
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Biobb_io is the Biobb module collection to fetch data to be consumed by the rest of the Biobb building blocks.
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Deprecated Package: biobb_md is no longer maintained and has been superseded by the biobb_gromacs package. Biobb_md is the Biobb module collection to perform molecular dynamics simulations.
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Biobb_ml is the Biobb module collection to perform machine learning predictions.
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Biobb_model is the Biobb module collection to check and model 3d structures, create mutations or reconstruct missing atoms.
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Biobb_NetProp is use case to build a prioritize PPI Network through Disc4All pre-process database REST API.
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Biobb_pmx is the Biobb module collection to perform PMX (http://pmx.mpibpc.mpg.de) executions.
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Biobb_remote is the Biobb module for remote execution via ssl.
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BioBB_structure_checking performs MDWeb structure checking tool set as a command line utility.
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BioBB_structure_manager is a library to efficiently load and process biomolecular 3D structures.
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biobb_structure_utils is the Biobb module collection to perform basic manipulations on 3d structures.
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Biobb_vs is the Biobb module collection to perform virtual screening studies.
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Lysozyme + Mutations workflow built using BioBB Based on the official Gromacs tutorial: http://www.mdtutorials.com/gmx/lysozyme/01_pdb2gmx.html
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Coming soon
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GPU accelerated light propagation tools
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Use bioBERT via BERN to label biomedical terms in docs
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Ready to use BioBert pytorch weights for HuggingFace pytorch BertModel.
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Library for interacting with the Galaxy API
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!!! PACKAGE IS IN DEVELOPMENT !!! Contains scripts used within the scope of the BIOBLU project. No warranty or guaranteed functionality.
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a collection of python scripts and functions for exploratory analysis of bioinformatic data in Python
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A BioGPT Chatbot of Discord and WhatsApp.
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Biobox provides a collection of data structures and methods for loading, manipulating and analyzing atomistic and pseudoatomistic structures.
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Run biobox Docker containers on the command line
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Create and run biobox Docker containers
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A Python library for bioinfomatics).
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A library for biological computing works
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Biobricks automates bioinformatics data.