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R-GenomicAlignments-1.32.1-4.fc39.x86_64.rpm

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توضیحات

Representation and manipulation of short genomic alignments
ویژگی مقدار
سیستم عامل Linux
توزیع Fedora 39
مخزن Fedora Everything x86_64
نام بسته R-GenomicAlignments
نام فایل بسته R-GenomicAlignments-1.32.1-4.fc39.x86_64.rpm
نسخه بسته 1.32.1
انتشار بسته 4.fc39
معماری بسته x86_64
نگهدارنده -
تاریخ ساخت Wed Jul 19 15
هاست سازنده buildhw-x86-02.iad2.fedoraproject.org
نوع بسته .rpm
آدرس صفحه اصلی http://www.bioconductor.org/packages/release/bioc/html/GenomicAlignments.html
مجوز Artistic 2.0
حجم دانلود 2.2M
حجم نصب 3.132M
Provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.


جایگزین ها

بسته نسخه معماری مخزن
R-GenomicAlignments-1.32.1-4.fc39.aarch64.rpm 1.32.1 aarch64 Fedora Everything
R-GenomicAlignments-1.32.1-4.fc39.src.rpm 1.32.1 i686 Fedora Everything
R-GenomicAlignments-debuginfo-1.32.1-4.fc39.aarch64.rpm 1.32.1 aarch64 Fedora Everything
R-GenomicAlignments-debuginfo-1.32.1-4.fc39.x86_64.rpm 1.32.1 x86_64 Fedora Everything
R-GenomicAlignments-debugsource-1.32.1-4.fc39.aarch64.rpm 1.32.1 aarch64 Fedora Everything
R-GenomicAlignments-debugsource-1.32.1-4.fc39.x86_64.rpm 1.32.1 x86_64 Fedora Everything


نیازمندی

مقدار نام
= 4.3 R(ABI)
>= 0.37.0 R(BiocGenerics)
- R(BiocParallel)
>= 2.55.7 R(Biostrings)
>= 1.13.1 R(GenomeInfoDb)
>= 1.41.5 R(GenomicRanges)
>= 2.23.9 R(IRanges)
>= 1.31.2 R(Rsamtools)
>= 0.27.12 R(S4Vectors)
>= 1.9.13 R(SummarizedExperiment)
- R(methods)
- R(stats)
- R(utils)
>= 4.0.0 R-core
- libR.so()(64bit)
- libc.so.6()(64bit)
- libc.so.6(GLIBC_2.2.5)(64bit)
- libc.so.6(GLIBC_2.3)(64bit)
- libc.so.6(GLIBC_2.3.4)(64bit)
- libc.so.6(GLIBC_2.4)(64bit)
- rtld(GNU_HASH)


ارائه دهنده

مقدار نام
= 1.32.1 R(GenomicAlignments)
= 1.32.1-4.fc39 R-GenomicAlignments
= 1.32.1-4.fc39 R-GenomicAlignments(x86-64)


نحوه نصب


نصب پکیج rpm R-GenomicAlignments:

    dnf install R-GenomicAlignments-1.32.1-4.fc39.x86_64.rpm


فایل ها

مسیرها
/usr/lib/.build-id
/usr/lib/.build-id/06
/usr/lib/.build-id/06/9d7cb506e084a077b80b8948e2dda8f69e0f62
/usr/lib64/R/library/GenomicAlignments
/usr/lib64/R/library/GenomicAlignments/CITATION
/usr/lib64/R/library/GenomicAlignments/DESCRIPTION
/usr/lib64/R/library/GenomicAlignments/INDEX
/usr/lib64/R/library/GenomicAlignments/Meta
/usr/lib64/R/library/GenomicAlignments/Meta/Rd.rds
/usr/lib64/R/library/GenomicAlignments/Meta/features.rds
/usr/lib64/R/library/GenomicAlignments/Meta/hsearch.rds
/usr/lib64/R/library/GenomicAlignments/Meta/links.rds
/usr/lib64/R/library/GenomicAlignments/Meta/nsInfo.rds
/usr/lib64/R/library/GenomicAlignments/Meta/package.rds
/usr/lib64/R/library/GenomicAlignments/Meta/vignette.rds
/usr/lib64/R/library/GenomicAlignments/NAMESPACE
/usr/lib64/R/library/GenomicAlignments/NEWS
/usr/lib64/R/library/GenomicAlignments/R
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments.rdb
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments.rdx
/usr/lib64/R/library/GenomicAlignments/doc
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.R
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.pdf
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.R
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.pdf
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.R
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.pdf
/usr/lib64/R/library/GenomicAlignments/doc/index.html
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.R
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.pdf
/usr/lib64/R/library/GenomicAlignments/extdata
/usr/lib64/R/library/GenomicAlignments/extdata/sm_treated1.bam
/usr/lib64/R/library/GenomicAlignments/extdata/sm_untreated1.bam
/usr/lib64/R/library/GenomicAlignments/help
/usr/lib64/R/library/GenomicAlignments/help/+5B+5B+2CGAlignmentPairs+2CANY+2CANY-method.html
/usr/lib64/R/library/GenomicAlignments/help/AnIndex
/usr/lib64/R/library/GenomicAlignments/help/CIGAR_OPS.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentPairs-class.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentPairs.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignments-class.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentsList-class.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentsList.html
/usr/lib64/R/library/GenomicAlignments/help/GappedReads-class.html
/usr/lib64/R/library/GenomicAlignments/help/GappedReads.html
... and 335 more


گزارش تغییرات

تاریخ آخرین تغییر جزئیات
2023-07-19

Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild

2023-04-21

R-maint-sig mass rebuild

2023-01-18

Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

2022-09-03

update to 1.32.1
rebuild for R 4.2.1

2022-07-20

Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

2022-01-19

Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild

2021-07-21

Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild