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python3-steps-3.6.0-28.fc38.x86_64.rpm

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توضیحات

STochastic Engine for Pathway Simulation
ویژگی مقدار
سیستم عامل Linux
توزیع Fedora 38
مخزن Fedora Everything x86_64
نام بسته python3-steps
نام فایل بسته python3-steps-3.6.0-28.fc38.x86_64.rpm
نسخه بسته 3.6.0
انتشار بسته 28.fc38
معماری بسته x86_64
نگهدارنده -
تاریخ ساخت Sun 05 Feb 2023 05
هاست سازنده buildvm-x86-15.iad2.fedoraproject.org
نوع بسته .rpm
آدرس صفحه اصلی http://steps.sourceforge.net/
مجوز GPLv2
حجم دانلود 1.6M
حجم نصب 6.988M
STEPS is a package for exact stochastic simulation of reaction-diffusion systems in arbitrarily complex 3D geometries. Our core simulation algorithm is an implementation of Gillespie's SSA, extended to deal with diffusion of molecules over the elements of a 3D tetrahedral mesh. While it was mainly developed for simulating detailed models of neuronal signaling pathways in dendrites and around synapses, it is a general tool and can be used for studying any biochemical pathway in which spatial gradients and morphology are thought to play a role. STEPS also supports accurate and efficient computational of local membrane potentials on tetrahedral meshes, with the addition of voltage-gated channels and currents. Tight integration between the reaction-diffusion calculations and the tetrahedral mesh potentials allows detailed coupling between molecular activity and local electrical excitability. We have implemented STEPS as a set of Python modules, which means STEPS users can use Python scripts to control all aspects of setting up the model, generating a mesh, controlling the simulation and generating and analyzing output. The core computational routines are still implemented as C/C++ extension modules for maximal speed of execution. STEPS 3.0.0 and above provide early parallel solution for stochastic spatial reaction-diffusion and electric field simulation. Documentation can be found here: http://steps.sourceforge.net/manual/manual_index.html


جایگزین ها

بسته نسخه معماری مخزن
python3-steps-3.6.0-28.fc38.aarch64.rpm 3.6.0 aarch64 Fedora Everything
python3-steps-debuginfo-3.6.0-28.fc38.aarch64.rpm 3.6.0 aarch64 Fedora Everything
python3-steps-debuginfo-3.6.0-28.fc38.x86_64.rpm 3.6.0 x86_64 Fedora Everything
python3-steps-mpich-3.6.0-28.fc38.aarch64.rpm 3.6.0 aarch64 Fedora Everything
python3-steps-mpich-3.6.0-28.fc38.x86_64.rpm 3.6.0 x86_64 Fedora Everything
python3-steps-mpich-debuginfo-3.6.0-28.fc38.aarch64.rpm 3.6.0 aarch64 Fedora Everything
python3-steps-mpich-debuginfo-3.6.0-28.fc38.x86_64.rpm 3.6.0 x86_64 Fedora Everything
python3-steps-openmpi-3.6.0-28.fc38.aarch64.rpm 3.6.0 aarch64 Fedora Everything
python3-steps-openmpi-3.6.0-28.fc38.x86_64.rpm 3.6.0 x86_64 Fedora Everything
python3-steps-openmpi-debuginfo-3.6.0-28.fc38.aarch64.rpm 3.6.0 aarch64 Fedora Everything
python3-steps-openmpi-debuginfo-3.6.0-28.fc38.x86_64.rpm 3.6.0 x86_64 Fedora Everything


نیازمندی

مقدار نام
- libc.so.6()(64bit)
- libc.so.6(GLIBC_2.14)(64bit)
- libc.so.6(GLIBC_2.2.5)(64bit)
- libc.so.6(GLIBC_2.3.4)(64bit)
- libc.so.6(GLIBC_2.32)(64bit)
- libc.so.6(GLIBC_2.33)(64bit)
- libc.so.6(GLIBC_2.4)(64bit)
- libgcc_s.so.1()(64bit)
- libgcc_s.so.1(GCC_3.0)(64bit)
- libgcc_s.so.1(GCC_3.3.1)(64bit)
- libgomp.so.1()(64bit)
- libgomp.so.1(GOMP_4.0)(64bit)
- libgomp.so.1(OMP_1.0)(64bit)
- libgtest.so.1.13.0()(64bit)
- libgtest_main.so.1.13.0()(64bit)
- libm.so.6()(64bit)
- libm.so.6(GLIBC_2.2.5)(64bit)
- libm.so.6(GLIBC_2.23)(64bit)
- libm.so.6(GLIBC_2.27)(64bit)
- libm.so.6(GLIBC_2.29)(64bit)
- libstdc++.so.6()(64bit)
- libstdc++.so.6(CXXABI_1.3)(64bit)
- libstdc++.so.6(CXXABI_1.3.5)(64bit)
- libstdc++.so.6(CXXABI_1.3.9)(64bit)
- libstdc++.so.6(GLIBCXX_3.4)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.14)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
= 3.11 python(abi)
- rtld(GNU_HASH)


ارائه دهنده

مقدار نام
= 2.6.0 bundled(sundials2)
= 3.6.0-28.fc38 python-steps
= 3.6.0-28.fc38 python3-steps
= 3.6.0-28.fc38 python3-steps(x86-64)
= 3.6.0-28.fc38 python3.11-steps
= 3.6 python3.11dist(steps)
= 3.6 python3dist(steps)
= 3.6.0-28.fc38 steps


نحوه نصب


نصب پکیج rpm python3-steps:

    dnf install python3-steps-3.6.0-28.fc38.x86_64.rpm


فایل ها

مسیرها
/usr/lib/.build-id
/usr/lib/.build-id/b2
/usr/lib/.build-id/b2/50ddbfb67499c4f73743e75d2aeb02da45be65
/usr/lib64/python3.11/site-packages/steps
/usr/lib64/python3.11/site-packages/steps-3.6.0-py3.11.egg-info
/usr/lib64/python3.11/site-packages/steps-3.6.0-py3.11.egg-info/PKG-INFO
/usr/lib64/python3.11/site-packages/steps-3.6.0-py3.11.egg-info/SOURCES.txt
/usr/lib64/python3.11/site-packages/steps-3.6.0-py3.11.egg-info/dependency_links.txt
/usr/lib64/python3.11/site-packages/steps-3.6.0-py3.11.egg-info/top_level.txt
/usr/lib64/python3.11/site-packages/steps/API_1
/usr/lib64/python3.11/site-packages/steps/API_1/__init__.py
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/__init__.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/__init__.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/geom.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/geom.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/model.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/model.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/quiet.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/quiet.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/rng.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/rng.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/solver.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/__pycache__/solver.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/geom.py
/usr/lib64/python3.11/site-packages/steps/API_1/model.py
/usr/lib64/python3.11/site-packages/steps/API_1/mpi
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/__init__.py
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/__pycache__
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/__pycache__/__init__.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/__pycache__/__init__.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/__pycache__/solver.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/__pycache__/solver.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/mpi/solver.py
/usr/lib64/python3.11/site-packages/steps/API_1/quiet.py
/usr/lib64/python3.11/site-packages/steps/API_1/rng.py
/usr/lib64/python3.11/site-packages/steps/API_1/solver.py
/usr/lib64/python3.11/site-packages/steps/API_1/utilities
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__init__.py
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/__init__.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/__init__.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/cubit_support.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/cubit_support.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/geom_decompose.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/geom_decompose.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/meshctrl.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/meshctrl.cpython-311.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/meshio.cpython-311.opt-1.pyc
/usr/lib64/python3.11/site-packages/steps/API_1/utilities/__pycache__/meshio.cpython-311.pyc
... and 98 more


گزارش تغییرات

تاریخ آخرین تغییر جزئیات
2023-02-03

Leaf package on ix86: drop ix86 support

2023-01-24

Rebuilt for gtest 1.13.0 (fix RHBZ#2164003)
Build with C++14 instead of C++11, since gtest dropped support
Add a missing #include directive for GCC 13

2023-01-24

Remove old easylogging++ sources from dist-git

2023-01-20

Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild

2022-09-08

Tidy up spec file formatting

2022-09-08

Stop numbering patches

2022-09-08

Unbundle easyloggingpp

2022-08-29

Improve treatment of bundled sundials(2)
Unbundling currently works up to linking, where there are undefined

2022-08-29

Use more standard macros where we can

2022-08-29

Add -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF to match %%cmake

2022-08-29

Use pkgconf to set unbundled gtest flags

2022-08-29

Simplify patch application

2022-08-29

Better handle bundled easyloggingpp dependency

2022-08-18

Remove unbundled dependencies in %%prep

2022-08-18

Remove workaround for pre-flexiblas Fedora versions

2022-08-18

Reduce macro indirection in the spec file