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openms-2.8.0-0.3.fc37.aarch64.rpm

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توضیحات

LC/MS data management and analyses
ویژگی مقدار
سیستم عامل Linux
توزیع Fedora 37
مخزن Fedora Everything aarch64
نام بسته openms
نام فایل بسته openms-2.8.0-0.3.fc37.aarch64.rpm
نسخه بسته 2.8.0
انتشار بسته 0.3.fc37
معماری بسته aarch64
نگهدارنده -
تاریخ ساخت Fri 19 Aug 2022 07
هاست سازنده buildvm-a64-15.iad2.fedoraproject.org
نوع بسته .rpm
آدرس صفحه اصلی http://www.openms.de/
مجوز BSD
حجم دانلود 8.8M
حجم نصب 39.914M
OpenMS is a C++ library for LC-MS data management and analyses. It offers an infrastructure for the rapid development of mass spectrometry related software. OpenMS is free software available under the three clause BSD license and runs under Windows, MacOSX and Linux. It comes with a vast variety of pre-built and ready-to-use tools for proteomics and metabolomics data analysis (TOPPTools) and powerful 2D and 3D visualization(TOPPView). OpenMS offers analyses for various quantitation protocols, including label-free quantitation, SILAC, iTRAQ, SRM, SWATH, etc. It provides built-in algorithms for de-novo identification and database search, as well as adapters to other state-of-the art tools like XTandem, Mascot, OMSSA, etc. It supports easy integration of OpenMS built tools into workflow engines like Knime, Galaxy, WS-Pgrade, and TOPPAS via the TOPPtools concept and a unified parameter handling via a 'common tool description' (CTD) scheme. The OpenMS Proteomics Pipeline is a pipeline for the analysis of HPLC-MS data. It consists of several small applications that can be chained to create analysis pipelines tailored for a specific problem. The TOPP tools are divided into several subgroups: - Graphical Tools - File Handling - Signal Processing and Preprocessing - Quantitation - Map Alignment - Protein/Peptide Identification - Protein/Peptide Processing - Targeted Experiments - Peptide Property Prediction - Misc


جایگزین ها

بسته نسخه معماری مخزن
openms-2.8.0-0.3.fc37.i686.rpm 2.8.0 i686 Fedora Everything
openms-2.8.0-0.3.fc37.src.rpm 2.8.0 i686 Fedora Everything
openms-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-data-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-data-2.8.0-0.3.fc37.i686.rpm 2.8.0 i686 Fedora Everything
openms-data-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-debuginfo-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-debuginfo-2.8.0-0.3.fc37.i686.rpm 2.8.0 i686 Fedora Everything
openms-debuginfo-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-debugsource-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-debugsource-2.8.0-0.3.fc37.i686.rpm 2.8.0 i686 Fedora Everything
openms-debugsource-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-devel-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-devel-2.8.0-0.3.fc37.i686.rpm 2.8.0 i686 Fedora Everything
openms-devel-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-doc-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-doc-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-tools-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-tools-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openms-tools-debuginfo-2.8.0-0.3.fc37.aarch64.rpm 2.8.0 aarch64 Fedora Everything
openms-tools-debuginfo-2.8.0-0.3.fc37.x86_64.rpm 2.8.0 x86_64 Fedora Everything
openmsx-17.0-3.fc37.aarch64.rpm 17.0 aarch64 Fedora Everything
openmsx-17.0-3.fc37.src.rpm 17.0 i686 Fedora Everything
openmsx-17.0-3.fc37.x86_64.rpm 17.0 x86_64 Fedora Everything
openmsx-19.1-1.fc37.aarch64.rpm 19.1 aarch64 Fedora Everything
openmsx-19.1-1.fc37.src.rpm 19.1 i686 Fedora Everything
openmsx-19.1-1.fc37.x86_64.rpm 19.1 x86_64 Fedora Everything
openmsx-catapult-17.0-3.fc37.aarch64.rpm 17.0 aarch64 Fedora Everything
openmsx-catapult-17.0-3.fc37.x86_64.rpm 17.0 x86_64 Fedora Everything
openmsx-catapult-19.1-1.fc37.aarch64.rpm 19.1 aarch64 Fedora Everything
openmsx-catapult-19.1-1.fc37.x86_64.rpm 19.1 x86_64 Fedora Everything
openmsx-debuginfo-17.0-3.fc37.aarch64.rpm 17.0 aarch64 Fedora Everything
openmsx-debuginfo-17.0-3.fc37.x86_64.rpm 17.0 x86_64 Fedora Everything
openmsx-debuginfo-19.1-1.fc37.aarch64.rpm 19.1 aarch64 Fedora Everything
openmsx-debuginfo-19.1-1.fc37.x86_64.rpm 19.1 x86_64 Fedora Everything
openmsx-debugsource-17.0-3.fc37.aarch64.rpm 17.0 aarch64 Fedora Everything
openmsx-debugsource-17.0-3.fc37.x86_64.rpm 17.0 x86_64 Fedora Everything
openmsx-debugsource-19.1-1.fc37.aarch64.rpm 19.1 aarch64 Fedora Everything
openmsx-debugsource-19.1-1.fc37.x86_64.rpm 19.1 x86_64 Fedora Everything


نیازمندی

مقدار نام
- R-core(aarch-64)
- ld-linux-aarch64.so.1()(64bit)
- ld-linux-aarch64.so.1(GLIBC_2.17)(64bit)
- libCbc.so.3()(64bit)
- libCgl.so.1()(64bit)
- libCoinUtils.so.3()(64bit)
- libOsiClp.so.1()(64bit)
- libQt5Core.so.5()(64bit)
- libQt5Core.so.5(Qt_5)(64bit)
- libQt5Gui.so.5()(64bit)
- libQt5Gui.so.5(Qt_5)(64bit)
- libQt5Network.so.5()(64bit)
- libQt5Network.so.5(Qt_5)(64bit)
- libQt5Sql.so.5()(64bit)
- libQt5Sql.so.5(Qt_5)(64bit)
- libQt5Svg.so.5()(64bit)
- libQt5Svg.so.5(Qt_5)(64bit)
- libQt5WebChannel.so.5()(64bit)
- libQt5WebChannel.so.5(Qt_5)(64bit)
- libQt5WebEngineWidgets.so.5()(64bit)
- libQt5WebEngineWidgets.so.5(Qt_5)(64bit)
- libQt5Widgets.so.5()(64bit)
- libQt5Widgets.so.5(Qt_5)(64bit)
- libWm5Mathematics.so.5()(64bit)
- libbz2.so.1()(64bit)
- libc.so.6()(64bit)
- libc.so.6(GLIBC_2.17)(64bit)
- libc.so.6(GLIBC_2.32)(64bit)
- libc.so.6(GLIBC_2.33)(64bit)
- libc.so.6(GLIBC_2.34)(64bit)
- libgcc_s.so.1()(64bit)
- libgcc_s.so.1(GCC_3.0)(64bit)
- libgcc_s.so.1(GCC_3.3.1)(64bit)
- libgcc_s.so.1(GCC_4.2.0)(64bit)
- libgcc_s.so.1(GCC_4.5.0)(64bit)
- libgomp.so.1()(64bit)
- libgomp.so.1(GOMP_1.0)(64bit)
- libgomp.so.1(GOMP_4.0)(64bit)
- libgomp.so.1(GOMP_4.5)(64bit)
- libgomp.so.1(OMP_1.0)(64bit)
- libgomp.so.1(OMP_3.0)(64bit)
- libhdf5.so.200()(64bit)
- libhdf5_cpp.so.200()(64bit)
- libm.so.6()(64bit)
- libm.so.6(GLIBC_2.17)(64bit)
- libm.so.6(GLIBC_2.23)(64bit)
- libm.so.6(GLIBC_2.27)(64bit)
- libm.so.6(GLIBC_2.29)(64bit)
- libsqlite3.so.0()(64bit)
- libstdc++.so.6()(64bit)
- libstdc++.so.6(CXXABI_1.3)(64bit)
- libstdc++.so.6(CXXABI_1.3.11)(64bit)
- libstdc++.so.6(CXXABI_1.3.13)(64bit)
- libstdc++.so.6(CXXABI_1.3.2)(64bit)
- libstdc++.so.6(CXXABI_1.3.3)(64bit)
- libstdc++.so.6(CXXABI_1.3.5)(64bit)
- libstdc++.so.6(CXXABI_1.3.8)(64bit)
- libstdc++.so.6(CXXABI_1.3.9)(64bit)
- libstdc++.so.6(GLIBCXX_3.4)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.14)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.19)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.22)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
- libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
- libsvm.so.3()(64bit)
- libxerces-c-3.2.so()(64bit)
- libz.so.1()(64bit)
= 2.8.0-0.3.fc37 openms-data(aarch-64)
- percolator(aarch-64)
- rtld(GNU_HASH)


ارائه دهنده

مقدار نام
- application()
- application(TOPPAS.desktop)
- application(TOPPView.desktop)
- application(inifileeditor.desktop)
- metainfo()
- metainfo(TOPPAS.appdata.xml)
- metainfo(TOPPView.appdata.xml)
= 2.8.0-0.3.fc37 openms
= 2.8.0-0.3.fc37 openms(aarch-64)


نحوه نصب


نصب پکیج rpm openms:

    dnf install openms-2.8.0-0.3.fc37.aarch64.rpm


فایل ها

مسیرها
/usr/bin/BaselineFilter
/usr/bin/CompNovo
/usr/bin/CompNovoCID
/usr/bin/ConsensusID
/usr/bin/ConsensusMapNormalizer
/usr/bin/DTAExtractor
/usr/bin/DatabaseFilter
/usr/bin/DatabaseSuitability
/usr/bin/Decharger
/usr/bin/EICExtractor
/usr/bin/ExecutePipeline
/usr/bin/FalseDiscoveryRate
/usr/bin/FeatureFinderCentroided
/usr/bin/FeatureFinderIdentification
/usr/bin/FeatureFinderIsotopeWavelet
/usr/bin/FeatureFinderMRM
/usr/bin/FeatureFinderMetabo
/usr/bin/FeatureFinderMultiplex
/usr/bin/FeatureLinkerLabeled
/usr/bin/FeatureLinkerUnlabeled
/usr/bin/FeatureLinkerUnlabeledKD
/usr/bin/FeatureLinkerUnlabeledQT
/usr/bin/FidoAdapter
/usr/bin/FileConverter
/usr/bin/FileInfo
/usr/bin/FileMerger
/usr/bin/GenericWrapper
/usr/bin/HighResPrecursorMassCorrector
/usr/bin/IDConflictResolver
/usr/bin/IDFileConverter
/usr/bin/IDFilter
/usr/bin/IDMapper
/usr/bin/IDMerger
/usr/bin/IDPosteriorErrorProbability
/usr/bin/IDRTCalibration
/usr/bin/IDRipper
/usr/bin/IDScoreSwitcher
/usr/bin/INIFileEditor
/usr/bin/InclusionExclusionListCreator
/usr/bin/InternalCalibration
/usr/bin/IsobaricAnalyzer
/usr/bin/LuciphorAdapter
/usr/bin/MRMMapper
/usr/bin/MRMTransitionGroupPicker
/usr/bin/MSGFPlusAdapter
/usr/bin/MapAlignerIdentification
/usr/bin/MapAlignerPoseClustering
/usr/bin/MapAlignerSpectrum
/usr/bin/MapNormalizer
/usr/bin/MapRTTransformer
... and 291 more


گزارش تغییرات

تاریخ آخرین تغییر جزئیات
2022-08-18

Rebuild for libsvm 3.3

2022-07-22

Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

2022-03-05

Pre-release 2.8.0
Patched for GCC-12
ExclusiveArch qt5_qtwebengine_arches

2022-01-20

Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild

2021-11-28

Rebuild for hdf5 1.12.1
Disable Python binding

2021-09-18

Release 2.7.0
Tests disabled
Use bundled seqan (optimized for OpenMS)

2021-08-10

Rebuild for hdf5 1.10.7

2021-08-07

Rebuilt for Boost 1.76

2021-07-22

Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild

2021-06-22

Patched for upstream bug #5381

2021-06-19

Release build
Enable Python binding (not in ARM and s390x)
Enable check

2021-02-17

Filter private libraries

2021-02-16

Remove fido-pi dependencies

2021-02-02

Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
Patch GLPK version

2021-01-22

Rebuilt for Boost 1.75

2020-10-25

Avoid skipping rpaths