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rapmap-dev_0.12.0+dfsg-3_all.deb
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مشاهده بیشترتوضیحات
rapmap - rapid sensitive and accurate DNA read mapping (some headers)
| ویژگی | مقدار |
|---|---|
| سیستم عامل | Linux |
| توزیع | Debian Buster-10 |
| مخزن | Debian main all |
| نام بسته | rapmap-dev |
| نام فایل بسته | rapmap-dev_0.12.0+dfsg-3_all.deb |
| نسخه بسته | 0.12.0+dfsg |
| انتشار بسته | 3 |
| معماری بسته | all |
| نگهدارنده | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| تاریخ ساخت | - |
| هاست سازنده | - |
| نوع بسته | .deb |
| آدرس صفحه اصلی | https://github.com/COMBINE-lab/RapMap |
| مجوز | - |
| حجم دانلود | 190792 |
| حجم نصب | 1108 |
RapMap is a testing ground for ideas in quasi-mapping / (lightweight /
pseudo) transcriptome alignment. That means that, at this point, it is
somewhat experimental. The develop branch will have the latest
improvements and additions, but is not guaranteed to be stable between
commits. Breaking changes to the master branch will be accompanied by a
tag to the version before the breaking change. Currently, RapMap is a
stand-alone quasi-mapper that can be used with other tools. It is also
being used as part of Sailfish and Salmon. Eventually, the hope is to
create and stabilize an API so that it can be used as a library from
other tools.
.
This package contains some headers and C++ source files which are
included by package salmon and are provided here in an accessible
way to avoid code duplication. Usually there is no reason to install
this package except to build the salmon package.
نیازمندی
| مقدار | نام |
|---|---|
| - |
نحوه نصب
نصب پکیج deb rapmap-dev:
sudo apt-get install rapmap-dev_0.12.0+dfsg-3_all.deb
فایل ها
| مسیرها |
|---|
| ./usr/include/rapmap/BooMap.hpp |
| ./usr/include/rapmap/BooPHF.hpp |
| ./usr/include/rapmap/FrugalBooMap.hpp |
| ./usr/include/rapmap/HitManager.hpp |
| ./usr/include/rapmap/IndexHeader.hpp |
| ./usr/include/rapmap/Kmer.hpp |
| ./usr/include/rapmap/PairAlignmentFormatter.hpp |
| ./usr/include/rapmap/RapMapConfig.hpp |
| ./usr/include/rapmap/RapMapFileSystem.hpp |
| ./usr/include/rapmap/RapMapSAIndex.hpp |
| ./usr/include/rapmap/RapMapUtils.hpp |
| ./usr/include/rapmap/SACollector.hpp |
| ./usr/include/rapmap/SASearcher.hpp |
| ./usr/include/rapmap/ScopedTimer.hpp |
| ./usr/include/rapmap/SingleAlignmentFormatter.hpp |
| ./usr/include/rapmap/SparseHashSerializer.hpp |
| ./usr/include/rapmap/SpinLock.hpp |
| ./usr/include/rapmap/bit_array.h |
| ./usr/include/rapmap/bit_macros.h |
| ./usr/include/rapmap/chobo/small_vector.hpp |
| ./usr/include/rapmap/digestpp/algorithm/blake.hpp |
| ./usr/include/rapmap/digestpp/algorithm/blake2.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/blake2_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/blake_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/blake2_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/blake_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/groestl_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/jh_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/kupyna_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/md5_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/sha1_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/sha2_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/sha3_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/skein_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/streebog_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/constants/whirlpool_constants.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/groestl_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/jh_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/k12m14_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/kmac_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/kupyna_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/md5_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/sha1_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/sha2_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/sha3_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/shake_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/skein_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/sm3_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/streebog_provider.hpp |
| ./usr/include/rapmap/digestpp/algorithm/detail/whirlpool_provider.hpp |
| ... and 46 more |