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python-pbcommand_1.1.1-1_all.deb

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توضیحات

common command-line interface for Pacific Biosciences analysis modules
ویژگی مقدار
سیستم عامل Linux
توزیع Debian Buster-10
مخزن Debian main all
نام بسته python-pbcommand
نام فایل بسته python-pbcommand_1.1.1-1_all.deb
نسخه بسته 1.1.1
انتشار بسته 1
معماری بسته all
نگهدارنده Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
تاریخ ساخت -
هاست سازنده -
نوع بسته .deb
آدرس صفحه اصلی https://pbcommand.readthedocs.org/en/latest/
مجوز -
حجم دانلود 88692
حجم نصب 450
To integrate with the pbsmrtpipe workflow engine, one must to be able to generate a Tool Contract and to be able to run from a Resolved Tool Contract. A Tool Contract contains the metadata of the exe, such as the file types of inputs, outputs and options. There are two principal use cases, first wrapping/calling Python functions that have been defined in external Python packages, or scripts. Second, creating a CLI tool that supports emitting tool contracts, running resolved tool contracts and complete argparse-style CLI.


نیازمندی

مقدار نام
- python-avro
- python-iso8601
- python-requests
- python-tz
<< 2.8 python:any
>= 2.7~ python:any
- python-numpy


نحوه نصب


نصب پکیج deb python-pbcommand:

    sudo apt-get install python-pbcommand_1.1.1-1_all.deb


فایل ها

مسیرها
./usr/lib/python2.7/dist-packages/pbcommand/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/core.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_app.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_gather_fasta_app.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_mixed_app.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_quick_hello_world.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_scatter_fasta_app.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_simple_app.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/dev_txt_app.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/template_simple.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/examples/template_subparser_simple.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/quick.py
./usr/lib/python2.7/dist-packages/pbcommand/cli/utils.py
./usr/lib/python2.7/dist-packages/pbcommand/common_options.py
./usr/lib/python2.7/dist-packages/pbcommand/engine/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/engine/runner.py
./usr/lib/python2.7/dist-packages/pbcommand/interactive_resolver.py
./usr/lib/python2.7/dist-packages/pbcommand/models/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/models/common.py
./usr/lib/python2.7/dist-packages/pbcommand/models/conditions.py
./usr/lib/python2.7/dist-packages/pbcommand/models/parser.py
./usr/lib/python2.7/dist-packages/pbcommand/models/report.py
./usr/lib/python2.7/dist-packages/pbcommand/models/tool_contract.py
./usr/lib/python2.7/dist-packages/pbcommand/pb_io/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/pb_io/common.py
./usr/lib/python2.7/dist-packages/pbcommand/pb_io/conditions.py
./usr/lib/python2.7/dist-packages/pbcommand/pb_io/report.py
./usr/lib/python2.7/dist-packages/pbcommand/pb_io/tool_contract_io.py
./usr/lib/python2.7/dist-packages/pbcommand/resolver.py
./usr/lib/python2.7/dist-packages/pbcommand/schemas/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/schemas/datastore.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/datastore_view_rules.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/pbreport.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/pipeline_presets.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/pipeline_presets_simple.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/pipeline_template_view_rules.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/report_spec.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/resolved_tool_contract.avsc
./usr/lib/python2.7/dist-packages/pbcommand/schemas/tool_contract.avsc
./usr/lib/python2.7/dist-packages/pbcommand/services/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/services/_service_access_layer.py
./usr/lib/python2.7/dist-packages/pbcommand/services/cli.py
./usr/lib/python2.7/dist-packages/pbcommand/services/models.py
./usr/lib/python2.7/dist-packages/pbcommand/services/utils.py
./usr/lib/python2.7/dist-packages/pbcommand/testkit/__init__.py
./usr/lib/python2.7/dist-packages/pbcommand/testkit/base_utils.py
./usr/lib/python2.7/dist-packages/pbcommand/testkit/core.py
./usr/lib/python2.7/dist-packages/pbcommand/testkit/nunit.py
... and 14 more