معرفی شرکت ها
q2-sample-classifier_2020.11.1-3_all.deb
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مشاهده بیشتر
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مشاهده بیشتر
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مشاهده بیشتر
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مشاهده بیشترتوضیحات
QIIME 2 plugin for machine learning prediction of sample data
| ویژگی | مقدار |
|---|---|
| سیستم عامل | Linux |
| توزیع | Debian Bullseye-11 |
| مخزن | Debian main all |
| نام بسته | q2-sample-classifier |
| نام فایل بسته | q2-sample-classifier_2020.11.1-3_all.deb |
| نسخه بسته | 2020.11.1 |
| انتشار بسته | 3 |
| معماری بسته | all |
| نگهدارنده | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| تاریخ ساخت | - |
| هاست سازنده | - |
| نوع بسته | .deb |
| آدرس صفحه اصلی | https://qiime2.org |
| مجوز | - |
| حجم دانلود | 565028 |
| حجم نصب | 846 |
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
researchers to start an analysis with raw DNA sequence data and finish with
publication-quality figures and statistical results.
Key features:
* Integrated and automatic tracking of data provenance
* Semantic type system
* Plugin system for extending microbiome analysis functionality
* Support for multiple types of user interfaces (e.g. API, command line,
graphical)
.
QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
retaining the features that makes QIIME 1 a powerful and widely-used analysis
pipeline.
.
QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
New functionality will regularly become available through QIIME 2 plugins. You
can view a list of plugins that are currently available on the QIIME 2 plugin
availability page. The future plugins page lists plugins that are being
developed.
.
Microbiome studies often aim to predict outcomes or differentiate samples
based on their microbial compositions, tasks that can be efficiently
performed by supervised learning methods. The q2-sample-classifier plugin
makes these methods more accessible, reproducible, and interpretable to
a broad audience of microbiologists, clinicians, and others who wish to
utilize supervised learning methods for predicting sample characteristics
based on microbiome composition or other "omics" data
نیازمندی
| مقدار | نام |
|---|---|
| - | python3:any |
| >= 2020.11.0 | qiime |
| - | python3-distutils |
| - | q2-types |
| - | q2-feature-table |
نحوه نصب
نصب پکیج deb q2-sample-classifier:
sudo apt-get install q2-sample-classifier_2020.11.1-3_all.deb
فایل ها
| مسیرها |
|---|
| ./usr/lib/python3/dist-packages/q2_sample_classifier/__init__.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/_format.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/_transformer.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/_type.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/_version.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/assets/index.html |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/citations.bib |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/classify.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/plugin_setup.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/__init__.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/categorical_predictions.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/chardonnay.map.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/chardonnay.table.qza |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/class_probabilities.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/coordinates.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/ecam-table-maturity.qza |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/ecam_map_maturity.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/empty_file.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/garbage.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/importance.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/importance_cv.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/outliers.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/predictions.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/vaw.qza |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/vaw.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/data/vaw_importance.tsv |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_actions.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_base_class.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_classifier.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_estimators.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_types_formats_transformers.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_utilities.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/tests/test_visualization.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/utilities.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier/visuals.py |
| ./usr/lib/python3/dist-packages/q2_sample_classifier-2020.11.1.egg-info/PKG-INFO |
| ./usr/lib/python3/dist-packages/q2_sample_classifier-2020.11.1.egg-info/dependency_links.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier-2020.11.1.egg-info/entry_points.txt |
| ./usr/lib/python3/dist-packages/q2_sample_classifier-2020.11.1.egg-info/not-zip-safe |
| ./usr/lib/python3/dist-packages/q2_sample_classifier-2020.11.1.egg-info/top_level.txt |
| ./usr/share/doc/q2-sample-classifier/changelog.Debian.gz |
| ./usr/share/doc/q2-sample-classifier/copyright |