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q2-cutadapt_2022.11.1-2_amd64.deb
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مشاهده بیشتر
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مشاهده بیشتر
تبلیغات ما
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مشاهده بیشتر
تبلیغات ما
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مشاهده بیشترتوضیحات
QIIME 2 plugin to work with adapters in sequence data
| ویژگی | مقدار |
|---|---|
| سیستم عامل | Linux |
| توزیع | Debian Bookworm-12 |
| مخزن | Debian main amd64 |
| نام بسته | q2-cutadapt |
| نام فایل بسته | q2-cutadapt_2022.11.1-2_amd64.deb |
| نسخه بسته | 2022.11.1 |
| انتشار بسته | 2 |
| معماری بسته | amd64 |
| نگهدارنده | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
| تاریخ ساخت | - |
| هاست سازنده | - |
| نوع بسته | .deb |
| آدرس صفحه اصلی | https://qiime2.org/ |
| مجوز | - |
| حجم دانلود | 2304656 |
| حجم نصب | 6830 |
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
researchers to start an analysis with raw DNA sequence data and finish with
publication-quality figures and statistical results.
Key features:
* Integrated and automatic tracking of data provenance
* Semantic type system
* Plugin system for extending microbiome analysis functionality
* Support for multiple types of user interfaces (e.g. API, command line,
graphical)
.
QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
retaining the features that makes QIIME 1 a powerful and widely-used analysis
pipeline.
.
QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
New functionality will regularly become available through QIIME 2 plugins. You
can view a list of plugins that are currently available on the QIIME 2 plugin
availability page. The future plugins page lists plugins that are being
developed.
جایگزین ها
| بسته | نسخه | معماری | مخزن |
|---|---|---|---|
| q2-cutadapt_2022.11.1-2_arm64.deb | 2022.11.1 | arm64 | Debian main |
| q2-cutadapt_2022.11.1-2_mips64el.deb | 2022.11.1 | mips64el | Debian main |
| q2-cutadapt_2022.11.1-2_ppc64el.deb | 2022.11.1 | ppc64el | Debian main |
نیازمندی
| مقدار | نام |
|---|---|
| - | python3:any |
| - | python3-numpy |
| - | python3-pandas |
| - | cutadapt |
| - | pigz |
| >= 2022.11.1 | qiime |
| >= 2022.11.1 | q2-types |
نحوه نصب
نصب پکیج deb q2-cutadapt:
sudo apt-get install q2-cutadapt_2022.11.1-2_amd64.deb
فایل ها
| مسیرها |
|---|
| ./usr/lib/python3/dist-packages/q2_cutadapt/__init__.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/_demux.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/_examples.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/_trim.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/_version.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/citations.bib |
| ./usr/lib/python3/dist-packages/q2_cutadapt/plugin_setup.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/__init__.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/forward.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/mixed-orientation/forward.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/mixed-orientation/reverse.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/MANIFEST |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/metadata.yml |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/sample_a_S01_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/sample_a_S01_L001_R2_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/sample_b_S02_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/sample_b_S02_L001_R2_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/sample_c_S03_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end/sample_c_S03_L001_R2_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end-unordered/MANIFEST |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end-unordered/metadata.yml |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end-unordered/sample_a_S01_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end-unordered/sample_a_S01_L001_R2_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end-unordered/sample_b_S00_L001_R2_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/paired-end-unordered/sample_b_S02_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/reverse.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end/MANIFEST |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end/metadata.yml |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end/sample_a_S01_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end/sample_b_S02_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end/sample_c_S03_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end-quality/MANIFEST |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end-quality/metadata.yml |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/single-end-quality/quality_sample_a_S01_L001_R1_001.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/test_data_quality.fastq |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/data/variable_length.fastq.gz |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/test_demux.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt/tests/test_trim.py |
| ./usr/lib/python3/dist-packages/q2_cutadapt-2022.11.1.egg-info/PKG-INFO |
| ./usr/lib/python3/dist-packages/q2_cutadapt-2022.11.1.egg-info/dependency_links.txt |
| ./usr/lib/python3/dist-packages/q2_cutadapt-2022.11.1.egg-info/entry_points.txt |
| ./usr/lib/python3/dist-packages/q2_cutadapt-2022.11.1.egg-info/not-zip-safe |
| ./usr/lib/python3/dist-packages/q2_cutadapt-2022.11.1.egg-info/top_level.txt |
| ./usr/share/doc/q2-cutadapt/changelog.Debian.gz |
| ./usr/share/doc/q2-cutadapt/copyright |