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frat-brain-1.4.0


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توضیحات

Application for ROI fMRI data analysis.
ویژگی مقدار
سیستم عامل -
نام فایل frat-brain-1.4.0
نام frat-brain
نسخه کتابخانه 1.4.0
نگهدارنده []
ایمیل نگهدارنده []
نویسنده Elliot Howley
ایمیل نویسنده elliohow@hotmail.com
آدرس صفحه اصلی https://fmri-roi-analysis-tool.readthedocs.io/en/latest/
آدرس اینترنتی https://pypi.org/project/frat-brain/
مجوز -
<img src="https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/docs/images/fRAT.gif?raw=true" width=500> # fRAT - fMRI ROI Analysis Tool [![status](https://joss.theoj.org/papers/cc9c0cb3b12abaf30c8381728d3229d7/status.svg)](https://joss.theoj.org/papers/cc9c0cb3b12abaf30c8381728d3229d7) [![PRs Welcome](https://img.shields.io/badge/PRs-welcome-brightgreen.svg?style=flat-square)](http://makeapullrequest.com) [![GitHub license](https://img.shields.io/hexpm/l/plug?style=flat-square)](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/LICENSE) [![Github release (latest by date)](https://img.shields.io/github/v/release/elliohow/fmri_roi_analysis_tool?style=flat-square)](https://github.com/elliohow/fmri_roi_analysis_tool/releases/latest) [![Github issues](https://img.shields.io/github/issues/elliohow/fmri_roi_analysis_tool?style=flat-square)](https://github.com/elliohow/fmri_roi_analysis_tool/issues) [![Documentation](https://img.shields.io/readthedocs/fmri-roi-analysis-tool)](https://fmri-roi-analysis-tool.readthedocs.io/en/latest/) fRAT is an open-source python-based GUI application used to simplify the processing and analysis of fMRI data by converting voxelwise maps into ROI-wise maps. An installation of FSL is required in order to use fRAT. > fRAT is written using **Python** for **MacOS, Linux and WSL2**. Documentation: [Home page](https://fmri-roi-analysis-tool.readthedocs.io) [Installation instructions](https://fmri-roi-analysis-tool.readthedocs.io/en/latest/installation.html) [ROI analysis tutorial](https://fmri-roi-analysis-tool.readthedocs.io/en/latest/tutorials/Basic-ROI-analysis.html) ## Reporting bugs To report a bug or suggest a new feature, please go to [fRAT's Issues](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/issues/new/choose). For other questions, issues or discussion please go to [fRAT's Discussions](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/discussions). ## Contributing to the project If you'd like to contribute to the project please read our [contributing guidelines](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/CONTRIBUTING.md). Please also read through our [code of conduct](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/CODE_OF_CONDUCT.md). ## Versioning We use [Semantic versioning](http://semver.org/) for versioning. For the versions available, see the [tag list](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/tags) for this project. ## Licensing This project uses the Apache 2.0 license. For the text version of the license see [here](https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/LICENSE). Prior to version 1.0.0, this project used an MIT license. ## Images <img src="https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/docs/images/GUI.png?raw=true" title="Example of the fRAT GUI" width=700> <img src="https://github.com/elliohow/fMRI_ROI_Analysis_Tool/blob/master/docs/images/HTML_report.png?raw=true" title="Example of a HTML report output by fRAT" width=600>


نیازمندی

مقدار نام
==0.17.2 altgraph
==0.0.2 bootstrapped
==1.0.9 brotli
==2022.12.7 certifi
==3.0.4 chardet
==2.0.12 charset-normalizer
==0.2.0 ci-info
==7.1.1 click
==1.0.7 contourpy
==0.10.0 cycler
==0.29.21 cython
==1.19.0 dash
==1.15.0 dash-core-components
==1.1.2 dash-html-components
==1.9.0 dash-renderer
==4.11.2 dash-table
==0.6 dataclasses
==4.4.2 decorator
==1.1.0 descartes
==0.3.6 dill
==2.6.0 dominate
==0.2.2 etelemetry
==3.0.12 filelock
==1.1.2 flask
==1.8.0 flask-compress
==4.38.0 fonttools
==3.4.0 fslpy
==1.0.2 funcsigs
==0.18.2 future
==22.10.2 gevent
==2.0.2 greenlet
==3.8.0 h5py
==2.9 idna
==2.9.0 imageio
==0.6.0 isodate
==1.1.0 itsdangerous
==2.11.3 jinja2
==1.2.0 joblib
==1.4.4 kiwisolver
==1.0.1 looseversion
==4.9.2 lxml
==1.15.2 macholib
==1.1.1 markupsafe
==3.6.3 matplotlib
==0.8.1 mizani
==0.70.14 multiprocess
==2.4 networkx
==5.0.1 neurdflib
==3.2.1 nibabel
==0.9.0 nilearn
==1.8.4 nipype
==1.22.3 numpy
==23.0 packaging
==3.3.0 palettable
==1.5.3 pandas
==0.2.6 pathos
==0.5.3 patsy
==9.3.0 pillow
==0.10.0 pip-autoremove
==4.14.3 plotly
==0.10.1 plotnine
==0.2.8 pox
==1.6.6.2 ppft
==1.5.3 prov
==1.4.1 pydot
==2.0.2 pydotplus
==4.9 pyinstaller
==2022.2 pyinstaller-hooks-contrib
==2.4.6 pyparsing
==2.8.1 python-dateutil
==2022.7.1 pytz
==1.4.1 pywavelets
==5.0.0 rdflib
==2.27.1 requests
==1.3.3 retrying
==0.19.3 scikit-image
==1.2.1 scikit-learn
==1.10.0 scipy
==3.17.0 simplejson
==1.14.0 six
==0.0 sklearn
==0.13.5 statsmodels
==0.8.9 tabulate
==8.2.0 tenacity
==2.1.0 threadpoolctl
==2021.7.30 tifffile
==0.10.2 toml
==6.3.2 traits
==1.26.5 urllib3
==1.0.1 werkzeug
==1.2.0 xlrd
==0.12.0 xmltodict
==4.5.0 zope-event
==5.2.0 zope-interface


زبان مورد نیاز

مقدار نام
>=3.10,<3.11 Python


نحوه نصب


نصب پکیج whl frat-brain-1.4.0:

    pip install frat-brain-1.4.0.whl


نصب پکیج tar.gz frat-brain-1.4.0:

    pip install frat-brain-1.4.0.tar.gz