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fenicsprecice-1.4.0


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توضیحات

FEniCS-preCICE adapter is a preCICE adapter for the open source computing platform FEniCS.
ویژگی مقدار
سیستم عامل -
نام فایل fenicsprecice-1.4.0
نام fenicsprecice
نسخه کتابخانه 1.4.0
نگهدارنده []
ایمیل نگهدارنده []
نویسنده the preCICE developers
ایمیل نویسنده info@precice.org
آدرس صفحه اصلی https://github.com/precice/fenics-adapter
آدرس اینترنتی https://pypi.org/project/fenicsprecice/
مجوز LGPL-3.0
# FEniCS-preCICE adapter <a style="text-decoration: none" href="https://github.com/precice/fenics-adapter/blob/master/LICENSE" target="_blank"> <img src="https://img.shields.io/github/license/precice/fenics-adapter.svg" alt="GNU LGPL license"> </a> <a style="text-decoration: none" href="https://doi.org/10.1016/j.softx.2021.100807" target="_blank"> <img src="https://zenodo.org/badge/DOI/10.1016/j.softx.2021.100807.svg" alt="DOI"> </a> <a style="text-decoration: none" href="https://github.com/precice/fenics-adapter/actions/workflows/build-and-test.yml" target="_blank"> <img src="https://github.com/precice/fenics-adapter/actions/workflows/build-and-test.yml/badge.svg" alt="Build and Test"> </a> <a style="text-decoration: none" href="https://github.com/precice/fenics-adapter/actions/workflows/run-tutorials.yml" target="_blank"> <img src="https://github.com/precice/fenics-adapter/actions/workflows/run-tutorials.yml/badge.svg" alt="Run preCICE Tutorials"> </a> <a style="text-decoration: none" href="https://pypi.org/project/fenicsprecice/" target="_blank"> <img src="https://github.com/precice/fenics-adapter/actions/workflows/pythonpublish.yml/badge.svg" alt="Upload Python Package"> </a> preCICE-adapter for the open source computing platform FEniCS. ## Installing the package ### Using pip3 to install from PyPI It is recommended to install [fenicsprecice from PyPI](https://pypi.org/project/fenicsprecice/) via ```bash pip3 install --user fenicsprecice ``` This should work out of the box, if all dependencies are installed correctly. If you face problems during installation or you want to run the tests, see below for a list of dependencies and alternative installation procedures ### Clone this repository and use pip3 #### Required dependencies Make sure to install the following dependencies: * [preCICE](https://github.com/precice/precice/wiki) * python3 (this adapter **only supports python3**) * [the python language bindings for preCICE](https://github.com/precice/python-bindings) * [FEniCS](https://fenicsproject.org/) (with python interface, installed by default) * and scipy (`pip3 install scipy`) #### Build and install the adapter After cloning this repository and switching to the root directory (`fenics-adapter`), run ``pip3 install --user .`` from your shell. #### Test the adapter As a first test, try to import the adapter via `python3 -c "import fenicsprecice"`. You can run the other tests via `python3 setup.py test`. Single tests can be also be run. For example the test `test_vector_write` in the file `test_write_read.py` can be run as follows: ```bash python3 -m unittest tests.test_write_read.TestWriteandReadData.test_vector_write ``` #### Troubleshooting **FEniCS is suddenly broken:** There are two known issues with preCICE, fenicsprecice and FEniCS: * If you see `ImportError: cannot import name 'sub_forms_by_domain'` run `pip3 uninstall -y fenics-ufl`. For details, refer to [issue #103](https://github.com/precice/fenics-adapter/issues/103). * If you see `ModuleNotFoundError: No module named 'dolfin'` and have installed PETSc from source, refer to [this forum post](https://fenicsproject.discourse.group/t/modulenotfounderror-no-module-named-dolfin-if-petsc-dir-is-set/4407). Short version: Try to use the PETSc that comes with your system, if possible. Note that you can also [compile preCICE without PETSc](https://www.precice.org/installation-source-configuration.html), if necessary. If this does not help, you can contact us on [gitter](https://gitter.im/precice/lobby) or [open an issue](https://github.com/precice/fenics-adapter/issues/new). ## Use the adapter Please refer to [our website](https://www.precice.org/adapter-fenics.html#how-can-i-use-my-own-solver-with-the-adapter-). ## Packaging To create and install the `fenicsprecice` python package the following instructions were used: [How To Package Your Python Code from python-packaging.readthedocs.io](https://python-packaging.readthedocs.io/en/latest/index.html). ## Citing * FEniCS-preCICE: If you are using this adapter (`fenics-adapter`), please refer to the [citing information on the FEniCS adapter](https://www.precice.org/adapter-fenics.html#how-to-cite). * preCICE: preCICE is an academic project, developed at the [Technical University of Munich](https://www5.in.tum.de/) and at the [University of Stuttgart](https://www.ipvs.uni-stuttgart.de/). If you use preCICE, please [cite preCICE](https://precice.org/publications.html#how-to-cite-precice). * FEniCS: If you are using FEniCS, please also consider the information on [the official FEniCS website on citing](https://fenicsproject.org/citing/). ## Development history The initial version of this adapter was developed by [Benjamin Rodenberg](https://www.in.tum.de/i05/personen/personen/benjamin-rodenberg/) during his research stay at Lund University in the group for [Numerical Analysis](http://www.maths.lu.se/english/research/research-divisions/numerical-analysis/) in close collaboration with [Peter Meisrimel](https://www.lunduniversity.lu.se/lucat/user/09d80f0367a060bcf2a22d7c22e5e504). [Richard Hertrich](https://github.com/richahert) contributed the possibility to perform FSI simulations using the adapter in his [Bachelor thesis](https://mediatum.ub.tum.de/node?id=1520579). [Ishaan Desai](https://www.ipvs.uni-stuttgart.de/institute/team/Desai/) improved the user interface and extended the adapter to allow for parallel FEniCS computations and 3D cases in certain scenarios.


نحوه نصب


نصب پکیج whl fenicsprecice-1.4.0:

    pip install fenicsprecice-1.4.0.whl


نصب پکیج tar.gz fenicsprecice-1.4.0:

    pip install fenicsprecice-1.4.0.tar.gz