EMG Analyzer
============
|Build Status| |Coverage Status|
Is a tool set to help to analyze ElectroMyoGraphy recorded via smart
analyzer. For now it is able to normalize The voltage from an
Electromyography recorded file (.emt file) and produce a new .emt file
with the normalized voltage, this new file can be open in smart
analyzer. The second script allow to generate new emt grouped by tracks.
Installation
------------
*emg\_analyzer* is not yet registered on PyPI so you need to install it
from github. It need at least python 3.6.
For users
~~~~~~~~~
::
python3.6 -m pip install --user git+https://github.com/freeh4cker/emg_analyzer.git#egg=emg_analyzer
For developers
~~~~~~~~~~~~~~
It's recommended to install *emg\_analyzer* in a virtualenv
::
python3.6 -m venv emg_env
source emg_env/bin/activate
Then install the project in editable mode
::
pip install -e git+https://github.com/freeh4cker/emg_analyzer.git#egg=emg_analyzer
quick start
-----------
:construction:
emg\_norm
~~~~~~~~~
To normalize tracks in emt file. There is to way to normalize tracks.
- all tracks are considered together to normalize (default)
- normalize tracks by tracks
::
emg_norm -v foo.emt
emg_norm -v --by-track foo.emt
emg\_group\_tracks
~~~~~~~~~~~~~~~~~~
emg\_group\_tracks take several emt files as input and groups tracks
base on their names. Creates one .emt file by tracks. for instance:
::
emg_group_tracks exp{1,2,3}.emt
with inputs
^^^^^^^^^^^
::
exp1.emt
track_A track_B track_C track_D
exp2.emt
track_B track_A track_D track_D
exp3.emt
track_D track_C track_D track_C
create outputs
^^^^^^^^^^^^^^
::
track_A.emt
exp1 exp2 exp3
track_B.emt
exp1 exp2 exp3
track_C.emt
exp1 exp2 exp3
track_D.emt
exp1 exp2 exp3
**Note:** you can pipe the 2 methods
::
emg_group_tracks exp{1,2,3}.emt | emg_norm -v
create outputs:
track\_A.emt , track\_B.emt, track\_C.emt, track\_D.emt,
track\_A\_norm.emt , track\_B\_norm.emt, track\_C\_norm.emt,
track\_D\_norm.emt
Contributing
------------
We encourage contributions, bug report, enhancement ...
But before to do that we encourage to read `the contributing
guide <CONTRIBUTING.md>`__.
.. |Build Status| image:: https://travis-ci.org/freeh4cker/emg_analyzer.svg?branch=master
:target: https://travis-ci.org/freeh4cker/emg_analyzer
.. |Coverage Status| image:: https://coveralls.io/repos/github/freeh4cker/emg_analyzer/badge.svg?branch=master
:target: https://coveralls.io/github/freeh4cker/emg_analyzer?branch=master
