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drs-client-0.2.0
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bravado generated mock GA4GH DRS client
| ویژگی | مقدار |
|---|---|
| سیستم عامل | - |
| نام فایل | drs-client-0.2.0 |
| نام | drs-client |
| نسخه کتابخانه | 0.2.0 |
| نگهدارنده | [] |
| ایمیل نگهدارنده | [] |
| نویسنده | ELIXIR Europe |
| ایمیل نویسنده | vani11537@one.ducic.ac.in |
| آدرس صفحه اصلی | https://github.com/elixir-europe/DRS-cli |
| آدرس اینترنتی | https://pypi.org/project/drs-client/ |
| مجوز | Apache License 2.0 |
[](https://badge.fury.io/py/drs-client) 
# DRS-cli
This repository contains a [Bravado]-based client for a mockup implementation of
the [Data Repository Service] API schema of the [Global Alliance for Genomics
and Health], as described in the [mock-DRS] repository. The client was developed
for the use within the [TEStribute] task distribution logic application.
## Usage
To use the client import it as follows in your Python code after
[installation](#Installation):
```py
import drs_client
client = drs_client.Client("http://localhost:9101/ga4gh/drs/v1/")
```
It is possible to supply a Bearer token, which will then be added to the
`Authentication` header (prepended by `Bearer`) for every outbound call:
```py
client = tes_client.Client(
url="https://path.to/swagger.json",
jwt="SomET0kEn"
)
```
> Note that the indicated URL is valid when [mock-DRS] was installed at the
> default location on your local machine. When a different DRS instance is
> supposed to be used, replace the full URL (including `http://` or `https://`).
Access the [mock-DRS] `GET /objects/{object_id}` endpoint with, e.g.:
```py
response = client.GetObject("a001")
```
Access the [mock-DRS] `POST /update-db` endpoint with, e.g.:
```py
response = client.updateDatabaseObjects(
clear_db=True,
objects=[
{
"access_methods": [
{
"access_id": "string",
"access_url": {"headers": ["Authorization"], "url": "string"},
"region": "us-east-1",
"type": "s3",
}
],
"aliases": ["string"],
"checksums": [{"checksum": "string", "type": "string"}],
"created": "string",
"description": "string",
"id": "string",
"mime_type": "application/json",
"name": "string",
"size": 0,
"updated": "string",
"version": "string",
},
],
)
```
the objects list can contain any number of such drs_object dicts and the clear_db
indicates weather or not the db should be emptied before upload of specified
objects.
For further details on populating the DRS via the `POST /update-db` endpoint,
please see the documentation in the [mock-DRS] repository.
Note that all other endpoints are currently not implemented.
## Installation
You can install `DRS-cli` in one of two ways:
### Manual installation
```bash
git clone https://github.com/elixir-europe/DRS-cli.git
cd DRS-cli
python setup.py install
```
### Installation via package manager
```bash
pip install -e git+https://github.com/elixir-europe/DRS-cli.git#egg=drs_client
```
or
```bash
pip install drs_client
```
## Contributing
This project is a community effort and lives off your contributions, be it in
the form of bug reports, feature requests, discussions, or fixes and other code
changes. Please read the [contributing guidelines] if you want to contribute.
And please mind the [code of conduct] for all interactions with the community.
## Versioning
Development of the app is currently still in alpha stage, and current versioning
is for internal use only. In the future, we are aiming to adopt [semantic
versioning] that is synchronized to the versioning of [TEStribute] and
[mock-TES] in order to ensure that these apps will be compatible as long as both
their major and minor versions match.
## License
This project is covered by the [Apache License 2.0] also available [shipped
with this repository](LICENSE).
## Contact
Please contact the [project leader](mailto:alexander.kanitz@sib.swiss) for
inquiries, proposals, questions etc. that are not covered by the
[Contributing](#Contributing) section.
## Acknowledgments
The project is a collaborative effort under the umbrella of the [ELIXIR Cloud
and AAI] group. It was started during the [2019 Google Summer of Code] as part
of the [Global Alliance for Genomics and Health] [organization].
![logo banner]
[Apache License 2.0]: <https://www.apache.org/licenses/LICENSE-2.0>
[2019 Google Summer of Code]: <https://summerofcode.withgoogle.com/projects/#6613336345542656>
[Bravado]: <https://github.com/Yelp/bravado>
[contributing guidelines]: CONTRIBUTING.md
[code of conduct]: CODE_OF_CONDUCT.md
[Data Repository Service]: <https://github.com/ga4gh/data-repository-service-schemas>
[ELIXIR Cloud and AAI]: <https://elixir-europe.github.io/cloud/>
[Global Alliance for Genomics and Health]: <https://www.ga4gh.org/>
[logo banner]: logos/logo-banner.svg
[mock-DRS]: <https://github.com/elixir-europe/mock-DRS>
[organization]: <https://summerofcode.withgoogle.com/organizations/6643588285333504/>
[semantic versioning]:https://semver.org/
[TESTribute]:https://github.com/elixir-europe/TEStribute
نیازمندی
| مقدار | نام |
|---|---|
| - | bravado[fido] |
زبان مورد نیاز
| مقدار | نام |
|---|---|
| >=3 | Python |
نحوه نصب
نصب پکیج whl drs-client-0.2.0:
pip install drs-client-0.2.0.whl
نصب پکیج tar.gz drs-client-0.2.0:
pip install drs-client-0.2.0.tar.gz