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cdlib-0.2.6
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مشاهده بیشترتوضیحات
Community Discovery Library
| ویژگی | مقدار |
|---|---|
| سیستم عامل | - |
| نام فایل | cdlib-0.2.6 |
| نام | cdlib |
| نسخه کتابخانه | 0.2.6 |
| نگهدارنده | [] |
| ایمیل نگهدارنده | [] |
| نویسنده | Giulio Rossetti |
| ایمیل نویسنده | giulio.rossetti@gmail.com |
| آدرس صفحه اصلی | https://github.com/GiulioRossetti/cdlib |
| آدرس اینترنتی | https://pypi.org/project/cdlib/ |
| مجوز | BSD-Clause-2 |
# CDlib - Community Discovery Library
[](https://codecov.io/gh/GiulioRossetti/cdlib)
[](https://github.com/GiulioRossetti/cdlib/actions/workflows/python-package.yml)
[](http://cdlib.readthedocs.io/en/latest/?badge=latest)
[](https://github.com/GiulioRossetti/cdlib/actions/workflows/codeql-analysis.yml)
[](https://pyup.io/repos/github/GiulioRossetti/cdlib/)
[](https://lgtm.com/projects/g/GiulioRossetti/nclib/context:python)
[](https://badge.fury.io/py/cdlib)
[](https://badge.fury.io/py/cdlib)
[](https://anaconda.org/giuliorossetti/cdlib)
[](https://github.com/psf/black)
[](https://pepy.tech/project/cdlib)
[](https://pepy.tech/project/cdlib)
[](https://doi.org/10.5281/zenodo.4575156)
[](https://sobigdata.d4science.org/group/sobigdata-gateway/explore?siteId=20371853)
[](https://twitter.com/_CDlib_)
<!---
[](https://app.fossa.io/projects/git%2Bgithub.com%2FGiulioRossetti%2Fcdlib?ref=badge_shield)
--->
``CDlib`` is a meta-library for community discovery in complex networks: it implements algorithms, clustering fitness functions as well as visualization facilities.
``CDlib`` is designed around the ``networkx`` python library: however, when needed, it takes care to automatically convert (from and to) ``igraph`` object so to provide an abstraction on specific algorithm implementations to the final user.
``CDlib`` provides a standardized input/output facilities for several Community Discovery algorithms: whenever possible, to guarantee literature coherent results, implementations of CD algorithms are inherited from their original projects (acknowledged on the [documentation](https://cdlib.readthedocs.io)).
If you use ``CDlib`` as support to your research consider citing:
> G. Rossetti, L. Milli, R. Cazabet.
> **CDlib: a Python Library to Extract, Compare and Evaluate Communities from Complex Networks.**
> Applied Network Science Journal. 2019.
> [DOI:10.1007/s41109-019-0165-9]()
## Tutorial and Online Environments
Check out the official [tutorial](https://colab.research.google.com/github/GiulioRossetti/cdlib/blob/master/docs/CDlib.ipynb) to get started!
If you would like to test ``CDlib`` functionalities without installing anything on your machine consider using the preconfigured Jupyter Hub instances offered by [SoBigData++](https://sobigdata.d4science.org/group/sobigdata-gateway/explore?siteId=20371853).
## Installation
``CDlib`` *requires* python>=3.8.
To install the latest version of our library just download (or clone) the current project, open a terminal and run the following commands:
```bash
pip install -r requirements.txt
pip install -r requirements_optional.txt # (Optional) this might not work in Windows systems due to C-based dependencies.
pip install .
```
Alternatively use pip
```bash
pip install cdlib
```
or conda
```bash
conda config --add channels giuliorossetti
conda config --add channels conda-forge
conda install cdlib
```
### Optional Dependencies (pip package)
``CDlib`` relies on a few packages calling C code that can be cumbersome to install on Windows machines: to address such issue, the default installation does not try to install set up such requirements.
Such a choice has been made to allow (even) non *unix user to install the library and get access to its core functionalities.
To integrate the standard installation with you can either:
- (Windows) manually install the optional packages (versions details are specified in ``requirements_optional.txt``) following the original projects guidelines, or
- (Linux/OSX) run the command:
```bash
pip install cdlib[C]
```
Such caveat will install everything that can be easily automated under Linux/OSX.
#### (Advanced)
##### Graph-tool
The only optional dependency that will remain unsatisfied following the previous procedures will be ``graph-tool`` (used to add SBM models).
If you need it up and running, refer to the official [documentation](https://git.skewed.de/count0/graph-tool/wikis/installation-instructions) and install the conda-forge version of the package.
##### ASLPAw
Since its 2.1.0 release ``ASLPAw`` relies on ``gmpy2`` whose installation through pip is not easy to automatize due to some C dependencies.
To address such issue test the following recipe:
```bash
conda install gmpy2
pip install shuffle_graph>=2.1.0 similarity-index-of-label-graph>=2.0.1 ASLPAw>=2.1.0
```
In case this does not solve the issue, please refer to the official ``gmpy2`` [installation](https://gmpy2.readthedocs.io/en/latest/intro.html#installation) instructions.
### Optional Dependencies (Conda package)
``CDlib`` relies on a few packages not available through conda: to install it please use pip:
```bash
pip install pycombo
pip install GraphRicciCurvature
conda install gmpy2
pip install shuffle_graph>=2.1.0 similarity-index-of-label-graph>=2.0.1 ASLPAw>=2.1.0
```
In case ASLPAw installation fails, please refer to the official ``gmpy2`` [installation](https://gmpy2.readthedocs.io/en/latest/intro.html#installation) instructions.
## Collaborate with us!
``CDlib`` is an active project, any contribution is welcome!
If you like to include your model in CDlib feel free to fork the project, open an issue and contact us.
### How to contribute to this project?
Contributing is good, doing it correctly is better! Check out our [rules](https://github.com/GiulioRossetti/cdlib/blob/master/.github/CONTRIBUTING.md), issue a proper [pull request](https://github.com/GiulioRossetti/cdlib/blob/master/.github/PULL_REQUEST_TEMPLATE.md) /[bug report](https://github.com/GiulioRossetti/cdlib/blob/master/.github/ISSUE_TEMPLATE/bug_report.md) / [feature request](https://github.com/GiulioRossetti/cdlib/blob/master/.github/ISSUE_TEMPLATE/feature_request.md).
We are a welcoming community... just follow the [Code of Conduct](https://github.com/GiulioRossetti/cdlib/blob/master/.github/CODE_OF_CONDUCT.md).
نیازمندی
| مقدار | نام |
|---|---|
| - | numpy |
| - | future |
| - | matplotlib |
| - | scikit-learn |
| - | tqdm |
| >=2.4 | networkx |
| - | demon |
| >=0.16 | python-louvain |
| - | nf1 |
| - | scipy |
| - | pulp |
| - | seaborn |
| - | pandas |
| - | eva-lcd |
| - | bimlpa |
| - | markov-clustering |
| - | chinese-whispers |
| - | python-igraph |
| - | angel-cd |
| - | pooch |
| - | dynetx |
| - | thresholdclustering |
| - | pyclustering |
| - | cython |
| - | python-Levenshtein |
| >=1.3.0 | infomap |
| >=1.0.2 | wurlitzer |
| - | GraphRicciCurvature |
| - | networkit |
| - | pycombo |
| - | leidenalg |
| - | karateclub |
نحوه نصب
نصب پکیج whl cdlib-0.2.6:
pip install cdlib-0.2.6.whl
نصب پکیج tar.gz cdlib-0.2.6:
pip install cdlib-0.2.6.tar.gz