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brain-pred-toolbox-2.3.2
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The Brain Predictability toolbox (BPt) is a Python based machine learning library designed to work with a range of neuroimaging data. Warning: Not actively maintained as of 11/30/22.
| ویژگی | مقدار |
|---|---|
| سیستم عامل | - |
| نام فایل | brain-pred-toolbox-2.3.2 |
| نام | brain-pred-toolbox |
| نسخه کتابخانه | 2.3.2 |
| نگهدارنده | [] |
| ایمیل نگهدارنده | [] |
| نویسنده | Sage Hahn |
| ایمیل نویسنده | sahahn@euvm.edu |
| آدرس صفحه اصلی | http://github.com/sahahn/BPt |
| آدرس اینترنتی | https://pypi.org/project/brain-pred-toolbox/ |
| مجوز | MIT |
# Brain Predictability Toolbox (BPt)
[](https://codecov.io/gh/sahahn/BPt) [](https://pypi.org/project/brain-pred-toolbox/) [](https://github.com/sahahn/BPt/actions) [](https://github.com/sahahn/BPt/actions) [](https://github.com/sahahn/BPt/actions)  [](https://pepy.tech/project/brain-pred-toolbox)
- The Brain Predictability toolbox (BPt) is a Python based Machine Learning library designed for working with Neuroimaging data. This library is particularly suited towards working with large neuroimaging datasets, where a large number of subjects with potentially multi-modal data are available.
- Warning: As of 11/30/22, BPt is entering a sort of legacy mode, where it will be no longer actively
developed. The library should still continue to work, as before, but the required python packages
are now far more restrictive than before, and may require a dedicated conda or virtual environment.
Unfortunately this is the nature of open-source academic software when not maintained by a dedicated
community, but that said, if anyone is interested in taking over,
they can feel free to message me about it (though in all honesty it may be a better
use of time to contibute to other projects with a more stable developer community instead).
- Please check out the project documentation at:
<https://sahahn.github.io/BPt/>
- This library is based on python and likely will require atleast some prior experience with python and machine learning.
### Install
----
**Note:** *This library is only tested on python versions 3.7+ so while 3.6 might work, for the most reliable performance please use higher versions of python!*
The easiest way to install the latest stable release of BPt is via pip, just run
```
pip install brain-pred-toolbox
```
The other method, to get the latest stable development version of the library is to clone this repository,
and then install it locally with once navigated into the main BPt folder
```
pip install .
```
### Quick Start Example
Load a pre-set BPt dataset, then
run a default 5-fold cross validation.
```
from BPt.datasets import load_cali
from BPt import evaluate
data = load_cali()
results = evaluate('elastic_pipe', data)
```
The returned object, stored in variable results, is an instance of class [EvalResults](https://sahahn.github.io/BPt/reference/api/BPt.EvalResults.html#BPt.EvalResults), which contains all types of information and metrics from the stored evaluation.
Check out the documentation at <https://sahahn.github.io/BPt/> for more examples on how to get started using BPt!
نیازمندی
| مقدار | نام |
|---|---|
| <1.1.4,>=1.1.0 | scikit-learn |
| <1.24,>=1.21 | numpy |
| <2.0,>=1.2 | scipy |
| <1.6,>=1.1.5 | pandas |
| <3.7,>=3.2.2 | matplotlib |
| <0.13,>=0.9 | seaborn |
| >=0.16 | scikit-image |
| >=4.51 | tqdm |
| <0.6,>=0.5.0 | nevergrad |
| - | Ipython |
| <2,>=1 | joblib |
| - | loky |
| >=3 | threadpoolctl |
| >=3.3.0 | lightgbm |
| >=0.9 | nilearn |
| - | python-docx |
| - | mvlearn |
| - | imblearn |
| >=1.4 | xgboost |
| - | bp-neurotools |
زبان مورد نیاز
| مقدار | نام |
|---|---|
| >=3.8 | Python |
نحوه نصب
نصب پکیج whl brain-pred-toolbox-2.3.2:
pip install brain-pred-toolbox-2.3.2.whl
نصب پکیج tar.gz brain-pred-toolbox-2.3.2:
pip install brain-pred-toolbox-2.3.2.tar.gz