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توضیحات

Relabel files in order to work on them blind

ویژگی	مقدار
سیستم عامل	-
نام فایل	blind-files-0.2.6
نام	blind-files
نسخه کتابخانه	0.2.6
نگهدارنده	[]
ایمیل نگهدارنده	[]
نویسنده	Pokey Rule
ایمیل نویسنده	755842+pokey@users.noreply.github.com
آدرس صفحه اصلی	-
آدرس اینترنتی	https://pypi.org/project/blind-files/
مجوز	MIT

# Blind files Generates a mapping from file names to blind but memorable file names. This script assumes that you have a directory that contains files and / or subdirectories with samples from an experiment. The names of these files and directories reveal which group the samples belong to, but the contents of the files do not. The script will move these files to a new directory, renaming them so that the new file names do not reveal which group the samples belong to. It will also generate a mapping file to indicate how the new files map to the original files. ## Installing ### Using [pipx](https://pypa.github.io/pipx/) ```sh pipx install blind_files ``` ## Running This script takes an input dir, and generates a directory containing a script, `blind.sh`, that can be used to blind the files in the input dir. It also generates a mapping csv, `mapping.csv`, that can be used after the user has done the analysis to see how the original names map to blinded names. The script has two modes of operation: ### Using a delimiter In the first mode of operation, you can specify a delimiter to use such that all the text before the delimiter in each file name will be replaced. For example: ```sh blind-files \ --mode delimiter \ --delimiter _foo \ --input-dir input_dir \ --output-dir output_dir \ --mapping-dir mapping_dir ``` In this case, if `input_dir` contains the following files: ``` sample_1_foo.txt sample_1_foo-bar.csv sample_2_foo.txt hello.txt ``` Then after running `mapping_dir/blind.sh`, `output_dir` will contain ``` golf_elbow_foo.txt golf_elbow_foo-bar.csv co-producer_reputation_foo.txt hello.txt ``` In `mapping_dir` you will also find a file `mapping.csv` with the contents: ``` original,blinded sample_1,golf_elbow sample_2,co-producer_reputation ``` #### Limitations This will only replace names at the top level of the input directory. If you have a more complex nested directory structure, where the identifer names may be buried in the directory tree, use identifier list approach described below. ### Using a list of identifiers In the second mode of operation, you can specify list of identifiers that should be blinded whenever they are encountered in the input directory tree. For example, if `identifiers.txt` contains the following: ``` group_a_1 group_b_1 ``` then running ```sh blind-files \ --mode identifiers \ --identifiers identifiers.txt \ --input-dir input_dir \ --output-dir output_dir \ --mapping-dir mapping_dir ``` In this case, if `input_dir` contains the following files: ``` group_a_1/group_a_1/foo.txt group_b_1/group_b_1/foo.txt hello.txt ``` Then after running `mapping_dir/blind.sh`, `output_dir` will contain ``` head_bottle/head_bottle/foo.txt eponym_curtain/eponym_curtain/foo.txt hello.txt ``` In `mapping_dir` you will also find a file `mapping.csv` with the contents: ``` original,blinded group_a_1,head_bottle group_b_1,eponym_curtain ``` #### Limitations No identifier can be a substring of any other identifier. For example, it is not allowed to have identifiers `sample_1` and `sample_11`. However, `sample_01` and `sample_11` would be fine. ## General limitations - This script should work on any platform, but has only been tested on Mac OS. - This script should handle symlinks by simply moving the symlink, without following it, but this behavior has not been tested. ## Credits This package was created with [Cookiecutter](https://github.com/audreyr/cookiecutter-pypackage). nounlist from [here](http://www.desiquintans.com/downloads/nounlist/nounlist.txt).

نیازمندی

مقدار	نام
>=1.4.4,<2.0.0	pyahocorasick
>=8.1.2,<9.0.0	click

زبان مورد نیاز

مقدار	نام
>=3.7,<4.0	Python

نحوه نصب

نصب پکیج whl blind-files-0.2.6:

pip install blind-files-0.2.6.whl

نصب پکیج tar.gz blind-files-0.2.6:

pip install blind-files-0.2.6.tar.gz