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aind-metadata-service-0.4.1


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توضیحات

REST service to retrive metadata from databases.
ویژگی مقدار
سیستم عامل -
نام فایل aind-metadata-service-0.4.1
نام aind-metadata-service
نسخه کتابخانه 0.4.1
نگهدارنده []
ایمیل نگهدارنده []
نویسنده Allen Institute for Neural Dynamics
ایمیل نویسنده -
آدرس صفحه اصلی -
آدرس اینترنتی https://pypi.org/project/aind-metadata-service/
مجوز MIT
# aind-metadata-service [![License](https://img.shields.io/badge/license-MIT-brightgreen)](LICENSE) ![Code Style](https://img.shields.io/badge/code%20style-black-black) REST service to retrieve metadata from databases. ## Installation ### Server Installation Can be pip installed using `pip install aind-metadata-service[server]`. Installing `pyodbc`. - You may need to install `unixodbc-dev`. You can follow this [https://learn.microsoft.com/en-us/sql/connect/odbc/linux-mac/installing-the-microsoft-odbc-driver-for-sql-server?view=sql-server-ver16](link) for instructions depending on your os. - You may need to run `docker system prune` before building the docker image if you're getting erros running apt-get: ``` #10 23.69 Err:1 http://deb.debian.org/debian bullseye/main amd64 libodbc1 amd64 2.3.6-0.1+b1 #10 23.69 Could not connect to debian.map.fastlydns.net:80 (146.75.42.132). - connect (111: Connection refused) Unable to connect to deb.debian.org:http: ``` ### Client Installation Can be pip installed with `pip install aind-metadata-service[client]` ### For Development In the root directory, run ``` pip install -e .[dev] ``` ## Contributing ### Linters and testing There are several libraries used to run linters, check documentation, and run tests. - Please test your changes using the **coverage** library, which will run the tests and log a coverage report: ``` coverage run -m unittest discover && coverage report ``` - Use **interrogate** to check that modules, methods, etc. have been documented thoroughly: ``` interrogate . ``` - Use **flake8** to check that code is up to standards (no unused imports, etc.): ``` flake8 . ``` - Use **black** to automatically format the code into PEP standards: ``` black . ``` - Use **isort** to automatically sort import statements: ``` isort . ``` ### Pull requests For internal members, please create a branch. For external members, please fork the repo and open a pull request from the fork. We'll primarily use [Angular](https://github.com/angular/angular/blob/main/CONTRIBUTING.md#commit) style for commit messages. Roughly, they should follow the pattern: ``` <type>(<scope>): <short summary> ``` where scope (optional) describes the packages affected by the code changes and type (mandatory) is one of: - **build**: Changes that affect the build system or external dependencies (example scopes: pyproject.toml, setup.py) - **ci**: Changes to our CI configuration files and scripts (examples: .github/workflows/ci.yml) - **docs**: Documentation only changes - **feat**: A new feature - **fix**: A bug fix - **perf**: A code change that improves performance - **refactor**: A code change that neither fixes a bug nor adds a feature - **test**: Adding missing tests or correcting existing tests ### Documentation To generate the rst files source files for documentation, run ``` sphinx-apidoc -o doc_template/source/ src ``` Then to create the documentation html files, run ``` sphinx-build -b html doc_template/source/ doc_template/build/html ``` More info on sphinx installation can be found here: https://www.sphinx-doc.org/en/master/usage/installation.html ### Responses There are 6 possible status code responses for aind-metadata-service: - **200**: successfully retrieved valid data without any problems. - **406**: successfully retrieved some data, but failed to validate against pydantic models. - **404**: found no data that matches query. - **300**: queried the server, but more items were returned than expected. - **503**: failed to connect to labtracks/sharepoint servers. - **500**: successfully connected to labtracks/sharepoint, but some other server error occurred. These status codes are defined in StatusCodes enum in response_handler.py


نیازمندی

مقدار نام
- requests
- aind-metadata-service[server]
- aind-metadata-service[client]
- black
- coverage
- flake8
- interrogate
- isort
- Sphinx
==0.12.20 aind-data-schema
- pyodbc
- office365-rest-python-client
- fastapi
- uvicorn[standard]
- python-dateutil


زبان مورد نیاز

مقدار نام
>=3.7 Python


نحوه نصب


نصب پکیج whl aind-metadata-service-0.4.1:

    pip install aind-metadata-service-0.4.1.whl


نصب پکیج tar.gz aind-metadata-service-0.4.1:

    pip install aind-metadata-service-0.4.1.tar.gz